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Development of an integrated prostate cancer research information system.
Clin Genitourin Cancer. 2006 Jun;5(1):61-6. doi: 10.3816/CGC.2006.n.019.
Clin Genitourin Cancer. 2006.
PMID: 16859581
Building a Harmonized Datamart by Integrating Cross-Institutional Systems of Clinical, Outcome, and Genomic Data: The Pediatric Patient Informatics Platform (PPIP).
Ma C, Sridharan M, Al-Sayegh H, Li A, Guo D, Auclair M, Kuragayala V, Bandaru C, Milne D, Cruse H, Beaudoin R, Orechia J, Bickel J, London WB.
Ma C, et al. Among authors: orechia j.
JCO Clin Cancer Inform. 2021 Feb;5:202-215. doi: 10.1200/CCI.20.00083.
JCO Clin Cancer Inform. 2021.
PMID: 33591797
Free article.
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SHRINE: enabling nationally scalable multi-site disease studies.
McMurry AJ, Murphy SN, MacFadden D, Weber G, Simons WW, Orechia J, Bickel J, Wattanasin N, Gilbert C, Trevvett P, Churchill S, Kohane IS.
McMurry AJ, et al. Among authors: orechia j.
PLoS One. 2013;8(3):e55811. doi: 10.1371/journal.pone.0055811. Epub 2013 Mar 7.
PLoS One. 2013.
PMID: 23533569
Free PMC article.
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OncDRS: An integrative clinical and genomic data platform for enabling translational research and precision medicine.
Orechia J, Pathak A, Shi Y, Nawani A, Belozerov A, Fontes C, Lakhiani C, Jawale C, Patel C, Quinn D, Botvinnik D, Mei E, Cotter E, Byleckie J, Ullman-Cullere M, Chhetri P, Chalasani P, Karnam P, Beaudoin R, Sahu S, Belozerova Y, Mathew JP.
Orechia J, et al.
Appl Transl Genom. 2015 Sep 14;6:18-25. doi: 10.1016/j.atg.2015.08.005. eCollection 2015 Sep.
Appl Transl Genom. 2015.
PMID: 27054074
Free PMC article.
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Correlation Between Surrogate End Points and Overall Survival in a Multi-institutional Clinicogenomic Cohort of Patients With Non-Small Cell Lung or Colorectal Cancer.
Kehl KL, Riely GJ, Lepisto EM, Lavery JA, Warner JL, LeNoue-Newton ML, Sweeney SM, Rudolph JE, Brown S, Yu C, Bedard PL, Schrag D, Panageas KS; American Association of Cancer Research (AACR) Project Genomics Evidence Neoplasia Information Exchange (GENIE) Consortium.
Kehl KL, et al.
JAMA Netw Open. 2021 Jul 1;4(7):e2117547. doi: 10.1001/jamanetworkopen.2021.17547.
JAMA Netw Open. 2021.
PMID: 34309669
Free PMC article.
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Implications of Selection Bias Due to Delayed Study Entry in Clinical Genomic Studies.
Brown S, Lavery JA, Shen R, Martin AS, Kehl KL, Sweeney SM, Lepisto EM, Rizvi H, McCarthy CG, Schultz N, Warner JL, Park BH, Bedard PL, Riely GJ, Schrag D, Panageas KS; AACR Project GENIE Consortium.
Brown S, et al.
JAMA Oncol. 2022 Feb 1;8(2):287-291. doi: 10.1001/jamaoncol.2021.5153.
JAMA Oncol. 2022.
PMID: 34734967
Free PMC article.
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Genomic analysis of early-stage lung cancer reveals a role for TP53 mutations in distant metastasis.
Van Egeren D, Kohli K, Warner JL, Bedard PL, Riely G, Lepisto E, Schrag D, LeNoue-Newton M, Catalano P, Kehl KL, Michor F; AACR Project GENIE Consortium represented by Shawn Sweeney.
Van Egeren D, et al.
Sci Rep. 2022 Nov 9;12(1):19055. doi: 10.1038/s41598-022-21448-1.
Sci Rep. 2022.
PMID: 36351964
Free PMC article.
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AACR Project GENIE: Powering Precision Medicine through an International Consortium.
AACR Project GENIE Consortium.
AACR Project GENIE Consortium.
Cancer Discov. 2017 Aug;7(8):818-831. doi: 10.1158/2159-8290.CD-17-0151. Epub 2017 Jun 1.
Cancer Discov. 2017.
PMID: 28572459
Free PMC article.
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