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pp-Blast: a "pseudo-parallel" Blast.
Osório EC, de Souza JE, Zaiats AC, de Oliveira PS, de Souza SJ. Osório EC, et al. Among authors: de souza sj, de souza je, de oliveira ps. Braz J Med Biol Res. 2003 Apr;36(4):463-4. doi: 10.1590/s0100-879x2003000400007. Epub 2003 Apr 8. Braz J Med Biol Res. 2003. PMID: 12700823 Free article.
ORESTES are enriched in rare exon usage variants affecting the encoded proteins.
Sakabe NJ, de Souza JE, Galante PA, de Oliveira PS, Passetti F, Brentani H, Osório EC, Zaiats AC, Leerkes MR, Kitajima JP, Brentani RR, Strausberg RL, Simpson AJ, de Souza SJ. Sakabe NJ, et al. Among authors: de souza sj, de souza je, de oliveira ps. C R Biol. 2003 Oct-Nov;326(10-11):979-85. doi: 10.1016/j.crvi.2003.09.027. C R Biol. 2003. PMID: 14744104 Free article.
ExInt: an Exon Intron Database.
Sakharkar M, Passetti F, de Souza JE, Long M, de Souza SJ. Sakharkar M, et al. Among authors: de souza sj, de souza je. Nucleic Acids Res. 2002 Jan 1;30(1):191-4. doi: 10.1093/nar/30.1.191. Nucleic Acids Res. 2002. PMID: 11752290 Free PMC article.
The impact of SNPs on the interpretation of SAGE and MPSS experimental data.
Silva AP, De Souza JE, Galante PA, Riggins GJ, De Souza SJ, Camargo AA. Silva AP, et al. Among authors: de souza sj, de souza je. Nucleic Acids Res. 2004 Nov 23;32(20):6104-10. doi: 10.1093/nar/gkh937. Print 2004. Nucleic Acids Res. 2004. PMID: 15562001 Free PMC article.
Shotgun sequencing of the human transcriptome with ORF expressed sequence tags.
Dias Neto E, Correa RG, Verjovski-Almeida S, Briones MR, Nagai MA, da Silva W Jr, Zago MA, Bordin S, Costa FF, Goldman GH, Carvalho AF, Matsukuma A, Baia GS, Simpson DH, Brunstein A, de Oliveira PS, Bucher P, Jongeneel CV, O'Hare MJ, Soares F, Brentani RR, Reis LF, de Souza SJ, Simpson AJ. Dias Neto E, et al. Among authors: de souza sj, de oliveira ps. Proc Natl Acad Sci U S A. 2000 Mar 28;97(7):3491-6. doi: 10.1073/pnas.97.7.3491. Proc Natl Acad Sci U S A. 2000. PMID: 10737800 Free PMC article.
Bioinformatics construction of the human cell surfaceome.
da Cunha JP, Galante PA, de Souza JE, de Souza RF, Carvalho PM, Ohara DT, Moura RP, Oba-Shinja SM, Marie SK, Silva WA Jr, Perez RO, Stransky B, Pieprzyk M, Moore J, Caballero O, Gama-Rodrigues J, Habr-Gama A, Kuo WP, Simpson AJ, Camargo AA, Old LJ, de Souza SJ. da Cunha JP, et al. Among authors: de souza rf, de souza sj, de souza je. Proc Natl Acad Sci U S A. 2009 Sep 29;106(39):16752-7. doi: 10.1073/pnas.0907939106. Epub 2009 Sep 15. Proc Natl Acad Sci U S A. 2009. PMID: 19805368 Free PMC article.
The human cell surfaceome of breast tumors.
da Cunha JP, Galante PA, de Souza JE, Pieprzyk M, Carraro DM, Old LJ, Camargo AA, de Souza SJ. da Cunha JP, et al. Among authors: de souza sj, de souza je. Biomed Res Int. 2013;2013:976816. doi: 10.1155/2013/976816. Epub 2013 Sep 9. Biomed Res Int. 2013. PMID: 24195083 Free PMC article.
137 results