Structure analysis of the rice yellow stunt rhabdovirus glycoprotein gene and its mRNA

Arch Virol. 1998;143(12):2453-9. doi: 10.1007/s007050050475.

Abstract

The nucleotide sequence of the glycoprotein (G) gene of rice yellow stunt rhabdovirus (RYSV) was determined. The G gene is 2158 nucleotides long and contains an open reading frame of 2007 nucleotides encoding a protein with a calculated molecular mass of 75,358 Da. Furthermore, the 5'- and 3'-terminal sequences of the G protein mRNA were defined by the RACE method. Non-viral nucleotides appear to be present at the 5' end of G mRNA. The G protein contains an N-terminal signal peptide of 32 amino acids, C-terminal transmembrane and cytoplasmic domains, ten potential glycosylation sites and four stretches of a-d hydrophobic heptad-repeats.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • DNA Primers / genetics
  • DNA, Complementary / genetics
  • DNA, Viral / genetics
  • Genes, Viral*
  • Glycoproteins / genetics*
  • Molecular Sequence Data
  • Oryza / virology
  • RNA, Messenger / genetics*
  • RNA, Viral / genetics*
  • Rhabdoviridae / genetics*
  • Rhabdoviridae / pathogenicity
  • Sequence Homology, Amino Acid
  • Viral Proteins / genetics*

Substances

  • DNA Primers
  • DNA, Complementary
  • DNA, Viral
  • Glycoproteins
  • RNA, Messenger
  • RNA, Viral
  • Viral Proteins

Associated data

  • GENBANK/AB002822