Chemical etiology of nucleic acid structure: comparing pentopyranosyl-(2'-->4') oligonucleotides with RNA

Science. 1999 Jan 29;283(5402):699-703. doi: 10.1126/science.283.5402.699.

Abstract

All four members of the family of pentopyranosyl-(2'-->4') oligonucleotide systems that contain beta-ribo-, beta-xylo-, alpha-lyxo-, or alpha-arabinopyranosyl units as repeating sugar building blocks are found to be much stronger Watson-Crick base-pairing systems than RNA. The alpha-arabinopyranosyl system is the strongest of all and in fact belongs to the strongest oligonucleotide base-pairing systems known. Whatever the chemical determinants by which nature selected RNA as a genetic system, maximization of base-pairing strengths within the domain of pentose-derived oligonucleotide systems was not the critical selection criterion.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabinose / chemistry
  • Base Pairing*
  • Circular Dichroism
  • Evolution, Molecular
  • Nucleic Acid Conformation
  • Nucleic Acid Denaturation
  • Oligonucleotides / chemistry*
  • Oligoribonucleotides / chemistry*
  • Pentoses / chemistry*
  • RNA / chemistry*
  • Ribose / chemistry
  • Temperature
  • Thermodynamics
  • Xylose / chemistry

Substances

  • Oligonucleotides
  • Oligoribonucleotides
  • Pentoses
  • RNA
  • lyxose
  • Ribose
  • Xylose
  • Arabinose