Evolutionary molecular engineering by random elongation mutagenesis

Nat Biotechnol. 1999 Jan;17(1):58-61. doi: 10.1038/5232.

Abstract

We describe a new method of random mutagenesis that employs the addition of peptide tails with random sequences to the C-terminal of enzyme molecules. A mutant population of catalase I from Bacillus stearothermophilus prepared by this method has a diversity in thermostability and enzyme activity equal to that obtained after random point mutagenesis. When a triple mutant of catalase I (I108T/D130N/1222T)-the thermostability of which is much lower than that of the wild type-was subjected to random elongation mutagenesis, we generated a mutant population containing only mutants with higher thermostability than the triple mutant. Some had an even higher stability than the wild-type enzyme, whose thermostability is considered to be optimized. These results indicate that peptide addition expands the protein sequence space resulting in a new fitness landscape. The enzyme can then move along the routes of the new landscape until it reaches a new optimum. The combination of random elongation mutagenesis with random point mutagenesis should be a useful approach to the in vitro evolution of proteins with new properties.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Catalase / chemistry
  • Catalase / genetics*
  • Catalase / metabolism*
  • Enzyme Stability / genetics
  • Evolution, Molecular
  • Molecular Sequence Data
  • Mutagenesis*
  • Mutation
  • Peptides / chemistry
  • Peptides / genetics
  • Peptides / metabolism
  • Protein Engineering / methods*

Substances

  • Peptides
  • catalase I
  • Catalase

Associated data

  • GENBANK/AB020064
  • GENBANK/AB020065
  • GENBANK/AB020066
  • GENBANK/AB020067
  • GENBANK/AB020068
  • GENBANK/AB020069
  • GENBANK/AB020070
  • GENBANK/AB020071
  • GENBANK/AB020072
  • GENBANK/AB020073
  • GENBANK/AB020074
  • GENBANK/AB020075
  • GENBANK/AB020076
  • GENBANK/AB020077
  • GENBANK/AB020078
  • GENBANK/AB020079
  • GENBANK/AB020080
  • GENBANK/AB020081
  • GENBANK/AB020082
  • GENBANK/AB020083
  • GENBANK/AB020084
  • GENBANK/AB020085
  • GENBANK/AB020086
  • GENBANK/AB020087
  • GENBANK/AB020088
  • GENBANK/AB020089
  • GENBANK/AB020090
  • GENBANK/AB020091
  • GENBANK/AB020092
  • GENBANK/AB020093