Evidence that P-TEFb alleviates the negative effect of DSIF on RNA polymerase II-dependent transcription in vitro

EMBO J. 1998 Dec 15;17(24):7395-403. doi: 10.1093/emboj/17.24.7395.

Abstract

Recently, a positive and a negative elongation factor, implicated in 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole (DRB) inhibition of transcription elongation, has been identified. P-TEFb is a positive transcription elongation factor and the DRB-sensitive kinase that phosphorylates the C-terminal domain (CTD) of the largest subunit of RNA polymerase II (Pol II). PITALRE, a member of the Cdc2 family of protein kinases, is the catalytic subunit of P-TEFb. DSIF is a human homolog of the yeast Spt4-Spt5 complex and renders elongation of transcription sensitive to DRB. DRB sensitivity-inducing factor (DSIF) binds to RNA Pol II and may directly regulate elongation. Here we show a functional interaction between P-TEFb and DSIF. The reduction of P-TEFb activity induced by either DRB, antibody against PITALRE, or immunodepletion resulted in a negative effect of DSIF on transcription. DSIF acts at an early phase of elongation, and the prior action of P-TEFb makes transcription resistant to DSIF. The state of phosphorylation of CTD determines the DSIF-RNA Pol II interaction, and may provide a direct link between P-TEFb and DSIF. Taken together, this study reveals a molecular basis for DRB action and suggests that P-TEFb stimulates elongation by alleviating the negative action of DSIF.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cyclin-Dependent Kinase 9
  • Cyclin-Dependent Kinases / metabolism
  • Dichlororibofuranosylbenzimidazole / pharmacology
  • Gene Expression Regulation
  • Humans
  • Models, Genetic
  • Nuclear Proteins / metabolism*
  • Phosphorylation
  • Positive Transcriptional Elongation Factor B
  • Protein Kinases
  • Protein Serine-Threonine Kinases / metabolism*
  • RNA Polymerase II / metabolism*
  • RNA, Messenger / biosynthesis
  • Repressor Proteins*
  • Transcription Factors
  • Transcription, Genetic*
  • Transcriptional Elongation Factors

Substances

  • Nuclear Proteins
  • RNA, Messenger
  • Repressor Proteins
  • SUPT4H1 protein, human
  • SUPT5H protein, human
  • Transcription Factors
  • Transcriptional Elongation Factors
  • Dichlororibofuranosylbenzimidazole
  • Protein Kinases
  • carboxy-terminal domain kinase
  • Positive Transcriptional Elongation Factor B
  • Protein Serine-Threonine Kinases
  • CDK9 protein, human
  • Cyclin-Dependent Kinase 9
  • Cyclin-Dependent Kinases
  • RNA Polymerase II