Deciphering RNA recognition: aminoglycoside binding to the hammerhead ribozyme

Chem Biol. 1998 Nov;5(11):R277-83. doi: 10.1016/s1074-5521(98)90286-1.

Abstract

Aminoglycoside antibiotics inhibit protein biosynthesis and various ribozymes. Structural electrostatic complementarity can explain the inhibition mechanism of the hammerhead ribozyme: positively charged ammonium groups match the negatively charged metal-ion-binding pockets created by the RNA fold's electrostatic field.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.
  • Review

MeSH terms

  • Aminoglycosides / metabolism*
  • Carbohydrate Sequence
  • Molecular Sequence Data
  • RNA / chemistry
  • RNA / metabolism*
  • RNA, Catalytic / metabolism*

Substances

  • Aminoglycosides
  • RNA, Catalytic
  • RNA