Divercin V41, a new bacteriocin with two disulphide bonds produced by Carnobacterium divergens V41: primary structure and genomic organization

Microbiology (Reading). 1998 Oct:144 ( Pt 10):2837-2844. doi: 10.1099/00221287-144-10-2837.

Abstract

Divercin V41 is a new bacteriocin produced by Carnobacterium divergens V41, a lactic acid bacterium isolated from fish viscera. The amino acid sequence of divercin V41 showed high homologies with pediocin PA-1 and enterocin A. Two disulphide bonds were present in the hydrophilic N-terminal domain and in the highly variable hydrophobic C-terminal domain, respectively. A DNA probe designed from the N-terminal sequence of the purified peptide was used to locate the structural gene of divercin V41. A 6 kb chromosomal fragment containing the divercin V41 structural gene (dvnA) was cloned and sequenced. The results indicate that divercin V41 is synthesized as a pre-bacteriocin of 66 amino acids. The 23-residue N-terminal extension is cleaved off to yield the mature 43-amino-acid divercin V41. In addition, the fragment encodes putative proteins commonly found within bacteriocin operons, including an ATP-dependent transporter, two immunity-like proteins and the two components of a lantibiotic-type signal-transducing system. The genetic organization of the fragment suggested important gene rearrangements.

MeSH terms

  • Amino Acid Sequence
  • Aspartic Acid / metabolism
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / isolation & purification
  • Bacteriocins / chemistry*
  • Bacteriocins / genetics
  • Bacteriocins / isolation & purification
  • Cloning, Molecular
  • Cysteine / metabolism
  • Disulfides / chemistry*
  • Disulfides / metabolism
  • Endopeptidases / metabolism
  • Genomic Library
  • Lactobacillaceae / metabolism*
  • Mass Spectrometry
  • Metalloendopeptidases
  • Molecular Sequence Data
  • Molecular Weight
  • Open Reading Frames / genetics
  • Peptides / chemistry
  • Polymerase Chain Reaction
  • Pyridines / metabolism
  • Sequence Alignment
  • Sequence Analysis

Substances

  • Bacterial Proteins
  • Bacteriocins
  • Disulfides
  • Peptides
  • Pyridines
  • divercin V41
  • Aspartic Acid
  • Endopeptidases
  • Metalloendopeptidases
  • endoproteinase Asp-N
  • 4-vinylpyridine
  • Cysteine

Associated data

  • GENBANK/AJ224003