Surface-enhanced Raman scattering and fluorescence spectroscopy reveal molecular interactions of all-trans retinoic acid and RAR gamma ligand-binding domain

Biospectroscopy. 1998;4(5):297-302. doi: 10.1002/(SICI)1520-6343(1998)4:5%3C297::AID-BSPY1%3E3.0.CO;2-6.

Abstract

Surface-enhanced Raman scattering and fluorescence were used to investigate the interactions of all-trans retinoic acid with the gamma-type retinoic acid receptor. Raman data revealed a significant attenuation in intensity of the bands originating from the retinoic acid polyenic chain upon receptor binding, with the spectrum being dominantly that of the beta-ionone ring. Fluorescence measurements supported the hydrophobic character of the ligand binding. These novel spectroscopic results are fully consistent with the published X-ray crystallographic data and suggest that these techniques may be valuable additional tools to characterize the interactions of agonists and antagonists with residues in the ligand-binding pockets of retinoid receptor homo- and heterodimers.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Crystallography, X-Ray
  • Receptors, Retinoic Acid / chemistry*
  • Receptors, Retinoic Acid / metabolism*
  • Retinoic Acid Receptor gamma
  • Spectrometry, Fluorescence / methods*
  • Spectrum Analysis, Raman / methods*
  • Tretinoin / chemistry*
  • Tretinoin / metabolism

Substances

  • Receptors, Retinoic Acid
  • Tretinoin