Mapping of the natural resistance-associated macrophage protein 1 (NRAMP1) gene to pig chromosome 15

Anim Genet. 1998 Apr;29(2):138-40. doi: 10.1046/j.1365-2052.1998.00298.x.

Abstract

The natural resistance-associated macrophage protein 1 (NRAMP1) was mapped in the pig for study as a potential candidate gene in controlling pig resistance to Salmonella infection. Primers were designed from the pig cDNA to amplify a 1.6 kb fragment between exons 1 and 3. By using a pig-rodent somatic cell hybrid panel, NRAMP1 was mapped to pig chromosome 15 (SSC15) with 100% probability, and the regional assignment was SSC15q23-26 with 87% concordance. A polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) marker was developed by using the HinfI enzyme and three alleles were identified from a population including 11 breeds. Linkage analysis confirmed the physical assignment by using the PiGMaP reference families. Pig NRAMP1 was linked to SSC15 markers S0088, S0149 and S0284 (LOD > 3). A small population study revealed large allele frequency differences among tested breeds. An A allele is only observed in dam (white) lines whereas a similar exclusivity of the C allele was seen in sire (colored) breeds.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Animals
  • Animals, Domestic / genetics*
  • Animals, Wild / genetics*
  • Carrier Proteins / chemistry
  • Carrier Proteins / genetics*
  • Cation Transport Proteins*
  • Chromosome Mapping / veterinary*
  • DNA Primers / chemistry
  • DNA, Complementary / chemistry
  • Genetic Markers
  • Genetic Variation / genetics
  • Hybrid Cells / chemistry
  • Immunity, Innate / genetics
  • Macrophages / chemistry
  • Membrane Proteins / chemistry
  • Membrane Proteins / genetics*
  • Polymerase Chain Reaction / veterinary
  • Polymorphism, Restriction Fragment Length
  • Population Dynamics
  • Restriction Mapping / veterinary*
  • Rodentia / genetics
  • Salmonella Infections, Animal / genetics
  • Salmonella Infections, Animal / immunology
  • Swine / genetics*
  • Swine Diseases / genetics
  • Swine Diseases / immunology

Substances

  • Carrier Proteins
  • Cation Transport Proteins
  • DNA Primers
  • DNA, Complementary
  • Genetic Markers
  • Membrane Proteins
  • natural resistance-associated macrophage protein 1