A diminished role for hydrogen bonds in antifreeze protein binding to ice

Biochemistry. 1997 Dec 2;36(48):14652-60. doi: 10.1021/bi970817d.

Abstract

The most abundant isoform (HPLC-6) of type I antifreeze protein (AFP1) in winter flounder is a 37-amino-acid-long, alanine-rich, alpha-helical peptide, containing four Thr spaced 11 amino acids apart. It is generally assumed that HPLC-6 binds ice through a hydrogen-bonding match between the Thr and neighboring Asx residues to oxygens atoms on the {2021} plane of the ice lattice. The result is a lowering of the nonequilibrium freezing point below the melting point (thermal hysteresis). HPLC-6, and two variants in which the central two Thr were replaced with either Ser or Val, were synthesized. The Ser variant was virtually inactive, while only a minor loss of activity was observed in the Val variant. CD, ultracentrifugation, and NMR studies indicated no significant structural changes or aggregation of the variants compared to HPLC-6. These results call into question the role of hydrogen bonds and suggest a much more significant role for entropic effects and van der Waals interactions in binding AFP to ice.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antifreeze Proteins
  • Centrifugation, Isopycnic
  • Circular Dichroism
  • Flounder
  • Freezing
  • Glycoproteins / chemistry
  • Glycoproteins / metabolism*
  • Hydrogen Bonding
  • Ice*
  • Molecular Sequence Data
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Structure, Secondary
  • Serine / chemistry
  • Serine / metabolism
  • Threonine / chemistry
  • Threonine / metabolism
  • Valine / chemistry
  • Valine / metabolism

Substances

  • Antifreeze Proteins
  • Glycoproteins
  • Ice
  • Threonine
  • Serine
  • Valine