Alpha-helical conformation in the C-terminal anchoring domains of E. coli penicillin-binding proteins 4, 5 and 6

Biochim Biophys Acta. 1997 Oct 23;1329(2):278-84. doi: 10.1016/s0005-2736(97)00117-x.

Abstract

The E. coli low molecular mass penicillin-binding proteins (PBP's) are penicillin sensitive, enzymes involved in the terminal stages of peptidoglycan biosynthesesis. These PBP's are believed to anchor to the periplasmic face of the inner membrane via C-terminal amphiphilic alpha-helices but to date the only support for this hypothesis has been obtained from theoretical analysis. In this paper, the conformational behaviour of synthetic peptides corresponding to these C-terminal anchoring domains was studied as a function of solvent, pH, sodium dodecyl sulphate micelles and phospholipid (DOPC, DOPG) vesicles using circular dichroism (CD) spectroscopy. The CD data showed that in 2,2,2-trifluoroethanol or sodium dodecylsulphate, all three peptides have the capacity to form an alpha-helical conformation but in aqueous solution or in the presence of phospholipid vesicles only those peptides corresponding to the PBP5 and PBP6 C-termini were observed to do so. A pH dependent loss of alpha-helical conformation in the peptide corresponding to the PBP5 C-terminus was found to correlate with the susceptibility of PBP5 to membrane extraction. This correlation would agree with the hypothesis that an alpha-helical conformation is required for membrane interaction of the PBP5 C-terminal region.

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins*
  • Carrier Proteins / chemistry*
  • Circular Dichroism
  • Escherichia coli
  • Hexosyltransferases*
  • Liposomes*
  • Molecular Sequence Data
  • Muramoylpentapeptide Carboxypeptidase / chemistry*
  • Penicillin-Binding Proteins
  • Penicillins / metabolism
  • Peptide Fragments / chemistry*
  • Peptides / chemical synthesis
  • Peptides / chemistry
  • Peptidyl Transferases*
  • Phosphatidylcholines
  • Phosphatidylglycerols
  • Protein Structure, Secondary*

Substances

  • Bacterial Proteins
  • Carrier Proteins
  • Liposomes
  • Penicillin-Binding Proteins
  • Penicillins
  • Peptide Fragments
  • Peptides
  • Phosphatidylcholines
  • Phosphatidylglycerols
  • 1,2-dioleoyl-sn-glycero-3-phosphoglycerol
  • Peptidyl Transferases
  • Hexosyltransferases
  • Muramoylpentapeptide Carboxypeptidase
  • 1,2-oleoylphosphatidylcholine