cDNA sequence of a translational elongation factor Ts homologue from Caenorhabditis elegans: mitochondrial factor-specific features found in the nematode homologue peptide

Biochim Biophys Acta. 1997 Jul 17;1353(1):7-12. doi: 10.1016/s0167-4781(97)00075-4.

Abstract

The cDNA for a homologue of elongation factor Ts which probably functions in mitochondria has been sequenced from a nematode Caenorhabditis elegans. The deduced amino acid sequence (316 amino acids long) has a possible transit peptide sequence at the amino terminus and several common specific features for mammalian mitochondrial EF-Ts. The amino acid identities in the protein from C. elegans compared with those of bovine mitochondria and Escherichia coli are 29.5% and 24.0%, respectively. The C. elegans sequence was classified as a long EF-Ts (ca. 280 amino acids long) similar to peptides from mammalian mitochondria and eubacteria other than Thermus and cyanobacteria (except Spirulina platensis), rather than short EF-Ts (ca. 200 amino acids long) as those of Thermus, cyanobacteria and plastids.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Caenorhabditis elegans / genetics*
  • DNA, Complementary / genetics*
  • Molecular Sequence Data
  • Peptide Elongation Factors / genetics*
  • Sequence Alignment

Substances

  • DNA, Complementary
  • Peptide Elongation Factors
  • elongation factor Ts

Associated data

  • GENBANK/AE000021
  • GENBANK/C08917
  • GENBANK/D87850
  • GENBANK/D90912
  • GENBANK/L37935
  • GENBANK/L37936
  • GENBANK/M31161
  • GENBANK/M79915
  • GENBANK/U32719
  • GENBANK/U38804
  • GENBANK/U39730
  • GENBANK/U60196
  • GENBANK/V00347
  • GENBANK/X53651
  • GENBANK/X67814
  • GENBANK/X83598
  • GENBANK/Z74024
  • GENBANK/Z78198