Efficient transcription of the tRNA-like structure of turnip yellow mosaic virus by a template-dependent and specific viral RNA polymerase obtained by a new procedure [corrected]

J Virol Methods. 1997 Mar;64(2):181-95. doi: 10.1016/s0166-0934(96)02166-0.

Abstract

The RNA-dependent RNA polymerase (RdRp) of turnip yellow mosaic virus (TYMV) was isolated by a simple, new method. An active, template-dependent and specific enzyme was obtained. Although the genomic RNA of TYMV could not be transcribed completely during an in vitro RdRp assay, a complete double-stranded product was obtained when a 3' terminal RNA fragment of 83 nucleotides was used as a template. The reaction product was identified as being of negative polarity by complete digestion with ribonuclease T1. Antibodies directed to part of the N-terminal (Ab140) or C-terminal (Ab66) in vitro autocleavage products of the large non-structural polyprotein of TYMV, could both partially inhibit RdRp activity. Further purification of the RdRp preparation by ion-exchange chromatography resulted in two activity peaks with different protein compositions. Both peak fractions retained high specificity for transcription of TYMV RNA. A protein of approximately 115 kDa was detected by both Ab140 and Ab66.

MeSH terms

  • Antibodies, Viral / immunology
  • Centrifugation, Density Gradient
  • Chemical Fractionation
  • Chromatography, Ion Exchange
  • Glycerol / chemistry
  • Micrococcal Nuclease / metabolism
  • RNA, Transfer*
  • RNA-Dependent RNA Polymerase / isolation & purification
  • RNA-Dependent RNA Polymerase / metabolism*
  • Substrate Specificity
  • Templates, Genetic
  • Transcription, Genetic*
  • Tymovirus / enzymology
  • Tymovirus / genetics*
  • Viral Proteins / isolation & purification
  • Viral Proteins / metabolism*

Substances

  • Antibodies, Viral
  • Viral Proteins
  • RNA, Transfer
  • RNA-Dependent RNA Polymerase
  • Micrococcal Nuclease
  • Glycerol