One-step, one-lane chemical DNA sequencing by N-methylformamide in the presence of metal ions

Biotechniques. 1996 Nov;21(5):910-7. doi: 10.2144/96215rr04.

Abstract

We report on a chemical method that allows DNA sequencing by a single reaction. It is based on treatment of 5'-end-labeled DNA with N-methylformamide in the presence of manganese. This method allows the manipulation of samples to be kept to a minimum and consists of a single chemical step that requires about 30 minutes to complete base degradation, phosphodiester bond cleavage and denaturation. Examples of one-treatment, one-lane DNA sequencing of both radioactively and fluorescently 5'-end-labeled DNAs are reported.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Formamides / pharmacology*
  • Manganese / pharmacology*
  • Sequence Analysis, DNA / methods*
  • Zinc / pharmacology

Substances

  • Formamides
  • Manganese
  • Zinc
  • methylformamide