A cytoplasmic 57-kDa protein that is required for translation of picornavirus RNA by internal ribosomal entry is identical to the nuclear pyrimidine tract-binding protein

Proc Natl Acad Sci U S A. 1993 Aug 15;90(16):7642-6. doi: 10.1073/pnas.90.16.7642.

Abstract

Initiation of translation of the RNA genomes of picornaviruses such as poliovirus and encephalomyocarditis virus is cap-independent and results from interaction of ribosomes with a segment of the 5' noncoding region of these mRNAs termed the internal ribosomal entry site. Genetic and biochemical studies have previously shown that a 57-kDa cytoplasmic RNA-binding protein (p57) plays an essential role in this translation mechanism. We have now found that p57 shares physical, biochemical, and antigenic properties with the pyrimidine tract-binding protein (PTB), a nuclear protein that has been implicated in various processes involving pre-mRNA. These data indicate that p57 and PTB are the same protein. Purified recombinant PTB bound specifically to a bulged hairpin within the internal ribosomal entry site of encephalomyocarditis virus and had a much lower affinity for a mutated derivative of this hairpin and for unrelated RNAs. Immunodepletion of p57/PTB from a HeLa cell-free lysate inhibited translation of poliovirus and encephalomyocarditis virus mRNAs but had no effect on translation of beta-globin mRNA, confirming the essential role of p57 in translation by internal ribosomal entry.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Base Sequence
  • Binding Sites
  • Cell Nucleus / metabolism*
  • Cytoplasm / metabolism
  • DNA-Binding Proteins / metabolism*
  • Encephalomyocarditis virus / genetics
  • Encephalomyocarditis virus / metabolism*
  • Globins / biosynthesis
  • HeLa Cells
  • Humans
  • Kinetics
  • Molecular Sequence Data
  • Molecular Weight
  • Neoplasm Proteins / isolation & purification
  • Neoplasm Proteins / metabolism*
  • Nucleic Acid Conformation
  • Poliovirus / genetics
  • Poliovirus / metabolism*
  • Polypyrimidine Tract-Binding Protein
  • Protein Biosynthesis*
  • RNA Precursors / metabolism
  • RNA, Messenger / metabolism*
  • RNA, Viral / metabolism*
  • RNA-Binding Proteins / metabolism*
  • Restriction Mapping
  • Ribosomes / metabolism*

Substances

  • DNA-Binding Proteins
  • Neoplasm Proteins
  • RNA Precursors
  • RNA, Messenger
  • RNA, Viral
  • RNA-Binding Proteins
  • Polypyrimidine Tract-Binding Protein
  • Globins