Crystal structure of the ribosomal protein S6 from Thermus thermophilus

EMBO J. 1994 Mar 15;13(6):1249-54. doi: 10.2210/pdb1ris/pdb.

Abstract

The amino acid sequence and crystal structure of the ribosomal protein S6 from the small ribosomal subunit of Thermus thermophilus have been determined. S6 is a small protein with 101 amino acid residues. The 3D structure, which was determined to 2.0 A resolution, consists of a four-stranded anti-parallel beta-sheet with two alpha-helices packed on one side. Similar folding patterns have been observed for other ribosomal proteins and may suggest an original RNA-interacting motif. Related topologies are also found in several other nucleic acid-interacting proteins and based on the assumption that the structure of the ribosome was established early in the molecular evolution, the possibility that an ancestral RNA-interacting motif in ribosomal proteins is the evolutionary origin for the nucleic acid-interacting domain in large classes of ribonucleic acid binding proteins should be considered.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Computer Graphics
  • Crystallography, X-Ray
  • Molecular Sequence Data
  • Protein Conformation
  • Ribosomal Protein S6
  • Ribosomal Proteins / chemistry*
  • Sequence Homology, Amino Acid
  • Thermus thermophilus / chemistry*

Substances

  • Ribosomal Protein S6
  • Ribosomal Proteins