Detection of African horsesickness virus by reverse transcriptase polymerase chain reaction (RT-PCR) using primers for segment 5 (NS1 gene)

J Vet Med Sci. 1994 Apr;56(2):347-52. doi: 10.1292/jvms.56.347.

Abstract

The reverse transcription followed by the polymerase chain reaction (RT-PCR) technique was applied to the detection of African horsesickness virus (AHSV) using primers specific for attenuated AHSV serotype 4 segment 5 (NS1 gene). Total RNA which contains both messenger RNA and genomic dsRNA was extracted by the acid guanidinium-phenol-chloroform method from the AHSV infected Vero cells and was used as templates to optimize the RT-PCR. A pair of primer (NP2-NP32) amplified the product of the expected size from all serotypes of attenuated AHSV when four pairs of primers were tested. Using this primer pair, no RT-PCR product was detected from the RNA samples extracted from ten other orbiviruses infected cells and their virions. In addition, RT-PCR using a serial dilution of RNA samples suggested that AHSV was efficiently detected from 1 to 2 cells of the cell monolayer infected with 10(6) TCID50 of AHSV. The RT-PCR concerning with total RNAs of AHSV NS1 gene was found to be a specific and sensitive method for the detection of AHSV.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • African Horse Sickness / diagnosis*
  • African Horse Sickness Virus / classification
  • African Horse Sickness Virus / genetics
  • African Horse Sickness Virus / isolation & purification*
  • Animals
  • Base Sequence
  • DNA Primers
  • Horses
  • Molecular Sequence Data
  • Orbivirus / genetics
  • Orbivirus / isolation & purification
  • Polymerase Chain Reaction / methods*
  • RNA, Messenger / analysis
  • RNA, Messenger / biosynthesis
  • RNA, Viral / analysis
  • RNA, Viral / genetics
  • Sensitivity and Specificity
  • Serotyping
  • Vero Cells
  • Viral Nonstructural Proteins / genetics*

Substances

  • DNA Primers
  • NS1 protein, African horse sickness virus
  • RNA, Messenger
  • RNA, Viral
  • Viral Nonstructural Proteins