The leucine-zipper in elongation factor EF-1 delta, a guanine-nucleotide exchange protein, is conserved in Artemia and Xenopus

Biochim Biophys Acta. 1994 Aug 2;1218(3):346-50. doi: 10.1016/0167-4781(94)90187-2.

Abstract

Elongation factor 1, a complex involved in protein biosynthesis, contains two guanine-nucleotide-exchange proteins EF-1 beta and EF-1 delta. The sequence of EF-1 delta of Artemia was determined with the purified protein. When compared to EF-1 delta from Xenopus, a high degree of identify (80%) was found in the C-terminal domains of the proteins, which contain the guanine-nucleotide-exchange activity. The N-terminal domains share only 23% of the amino acids at identical positions, and therefore they were further analysed for less obvious types of homology. To this end, a published approach for sequence analysis, which can detect peculiar amino acid patterns in proteins was applied. In this way, a weak albeit unmistakable similarity between the two EF-1 delta proteins was demonstrated in the region of the leucine-zippers, apart from the leucine repeat itself. Apparently, they display a common structural pattern in their N-terminal domains, which so far has been observed mainly in transcription factors.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Artemia / genetics*
  • Consensus Sequence
  • Conserved Sequence
  • GTP-Binding Proteins / chemistry
  • GTP-Binding Proteins / genetics*
  • Leucine Zippers*
  • Molecular Sequence Data
  • Peptide Elongation Factor 1
  • Peptide Elongation Factors / chemistry
  • Peptide Elongation Factors / genetics*
  • Ribonucleoproteins / genetics
  • Sequence Homology, Amino Acid
  • Xenopus / genetics*

Substances

  • Peptide Elongation Factor 1
  • Peptide Elongation Factors
  • Ribonucleoproteins
  • GTP-Binding Proteins