Physical mapping at 6q27 of the locus for the TATA box-binding protein, the DNA-binding subunit of TFIID and a component of SL1 and TFIIIB, strongly suggests that it is single copy in the human genome

Genomics. 1994 Jul 1;22(1):94-100. doi: 10.1006/geno.1994.1349.

Abstract

The TATA box-binding protein (TBP) has a fundamental role in eukaryotic cell metabolism, since it is necessary for transcription of class I, class II, and class III genes; in fact, TBP is the DNA-binding subunit of TFIID and a component of SL1 and TFIIIB. Contrary to the previously hypothesized existence of a family of genes coding for DNA-binding proteins highly related to TBP, our experiments show that the segment coding for the evolutionarily well-conserved carboxyl-terminal domain, involved in DNA binding, is unique; accordingly, we conclude that the TBP locus itself, which we have localized to 6q27, is single copy in the human genome. On the other hand, a cDNA fragment coding for the evolutionarily variable amino-terminal domain detects multiple cross-hybridizing sequences in the genome of higher eukaryotes. We suggest that the common motif is represented by the long string of glutamine codons, which characterizes the amino-terminal segment of human TBP: in fact, other proteins involved in transcription, such as TAF II 110, Sp1, and some homeobox proteins, are known to contain glutamine-rich segments.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Biological Evolution
  • Chromosome Mapping
  • Chromosomes, Human, Pair 6*
  • DNA-Binding Proteins / genetics*
  • Genome, Human
  • Humans
  • Hybrid Cells
  • In Situ Hybridization, Fluorescence
  • Pol1 Transcription Initiation Complex Proteins*
  • TATA-Box Binding Protein
  • Transcription Factor TFIID
  • Transcription Factor TFIIIB
  • Transcription Factors / chemistry
  • Transcription Factors / genetics*

Substances

  • DNA-Binding Proteins
  • Pol1 Transcription Initiation Complex Proteins
  • TATA-Box Binding Protein
  • Transcription Factor TFIID
  • Transcription Factor TFIIIB
  • Transcription Factors
  • transcription initiation factor TIF-IB