A Drosophila hsp70 gene contains long, antiparallel, coupled open reading frames (LAC ORFs) conserved in homologous loci

J Mol Evol. 1995 Oct;41(4):414-20. doi: 10.1007/BF00160312.

Abstract

A clone isolated from a Drosophila auraria heat-shock cDNA library presents two long, antiparallel, coupled (LAC) open reading frames (ORFs). One strand ORF is 1,929 nucleotides long and exhibits great identity (87.5% at the nucleotide level and 94% at the amino acid level) with the hsp70 gene copies of D. melanogaster, while the second strand ORF, in antiparallel in-frame register arrangement, is 1,839 nucleotides long and exhibits 32% identity with a putative, recently identified, NAD(+)-dependent glutamate dehydrogenase (NAD(+)-GDH). The overlap of the two ORFs is 1,824 nucleotides long. Computational analysis shows that this LAC ORF arrangement is conserved in other hsp70 loci in a wide range of organisms, raising questions about possible evolutionary benefits of such a peculiar genomic organization.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Biological Evolution*
  • Conserved Sequence
  • Drosophila / genetics*
  • Drosophila melanogaster / genetics
  • Genes, Insect*
  • HSP70 Heat-Shock Proteins / genetics*
  • Humans
  • Molecular Sequence Data
  • Multigene Family*
  • Open Reading Frames*
  • Phylogeny
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid

Substances

  • HSP70 Heat-Shock Proteins

Associated data

  • GENBANK/D10765
  • GENBANK/D14499
  • GENBANK/L01500
  • GENBANK/L14605
  • GENBANK/L22015
  • GENBANK/M95682
  • GENBANK/S40718
  • GENBANK/S78631
  • GENBANK/U02504
  • GENBANK/X51758
  • GENBANK/X78403
  • GENBANK/Z15041
  • GENBANK/Z27118