Transcription factor-induced, phased bending of the E-selectin promoter

J Biol Chem. 1994 Dec 16;269(50):31756-62.

Abstract

E-selectin is an endothelial adhesion molecule that is critically involved in neutrophil adhesion and recruitment. All DNA elements required for interleukin-1 inducibility have been located in the proximal promoter: an NF-ELAM1/ATF site, two NF-kappa B sites (I and II), the NF-ELAM2 element and a TATA box. We show here that interleukin-1 induced promoter activity is exquisitely sensitive to the spatial arrangements of these elements. Phasing of the ATF and NF-kappa B II elements indicates that their relative helix orientation is more important than distance per se. This sensitivity is partly due to a requirement for correctly oriented, transcription factor-induced DNA-bending. (i) Band shift analyses with permuted ATF- and NF-kappa B elements show that their associated factors all bend DNA. (ii) One can functionally replace the NF-ELAM1/ATF element by a subset of a panel of DNA fragments that contain defined bends in various planes. We conclude that the main role of the factors binding at the NF-ELAM1/ATF element is to alter the conformation of the E-selectin promoter, presumably looping distant enhancer elements into each other's proximity.

MeSH terms

  • Base Sequence
  • Cell Adhesion Molecules / genetics*
  • DNA-Binding Proteins / metabolism*
  • E-Selectin
  • Enhancer Elements, Genetic
  • Gene Expression Regulation
  • HeLa Cells
  • Humans
  • In Vitro Techniques
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Oligodeoxyribonucleotides / chemistry
  • Promoter Regions, Genetic*
  • Structure-Activity Relationship
  • Transcription Factors / metabolism*

Substances

  • Cell Adhesion Molecules
  • DNA-Binding Proteins
  • E-Selectin
  • Oligodeoxyribonucleotides
  • Transcription Factors

Associated data

  • GENBANK/M58017
  • GENBANK/M61895
  • GENBANK/M64485