Rapidly-frozen polypeptide samples for characterization of high definition dynamics by solid-state NMR spectroscopy

Biochem Biophys Res Commun. 1993 Dec 15;197(2):904-9. doi: 10.1006/bbrc.1993.2564.

Abstract

A method is described for defining anisotropic local dynamics in polypeptides by solid-state NMR. To avoid conformational heterogeneity introduced by large hexagonal ice crystals in low temperature hydrated samples, a fast-freezing technique is used for sample preparation. For a demonstration of this approach, the backbone librational motions of the gramicidin A channel conformation are studied in hydrated DMPC bilayers. The static 15N chemical shift tensor is characterized at 123 K for the Ala3 site. The temperature dependence of this tensor yields a determination of the librational amplitude and anisotropy of the motionally sampled space. This amplitude represents the sum of nanosecond and picosecond time-frame motions, both of which have a significant amplitude.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Alanine
  • Amino Acid Sequence
  • Freezing
  • Gramicidin / chemistry*
  • Ice
  • Magnetic Resonance Spectroscopy / methods
  • Molecular Sequence Data
  • Peptides / chemistry*
  • Protein Conformation*
  • Thermodynamics

Substances

  • Ice
  • Peptides
  • Gramicidin
  • Alanine