In a previous report, we described a new method called FPi analysis to analyze time sequences of DNA histograms taken from a perturbed population of cells. In this paper we utilize the method to analyze the in vivo kinetic response of bone marrow and of lung metastases of the B16 tumor to various chemotherapeutic agents. We show that the technique allows useful kinetic data to be obtained with minimal processing of the raw histograms, thus allowing fast analysis of the data. We also show that, in order to monitor the kinetic response of living tissues, it is essential to collect multiparameter distributions; to monitor only the one dimensional fluorescence histogram can give rise to misleading results. Using these multiparameter histograms, we are also able to monitor the growth fraction of the lung metastases during treatment, allowing discrimination between cell synchrony and cell recruitment from the resting compartment.