Structures of the mumps virus polymerase complex via cryo-electron microscopy

Nat Commun. 2024 May 17;15(1):4189. doi: 10.1038/s41467-024-48389-9.

Abstract

The viral polymerase complex, comprising the large protein (L) and phosphoprotein (P), is crucial for both genome replication and transcription in non-segmented negative-strand RNA viruses (nsNSVs), while structures corresponding to these activities remain obscure. Here, we resolved two L-P complex conformations from the mumps virus (MuV), a typical member of nsNSVs, via cryogenic-electron microscopy. One conformation presents all five domains of L forming a continuous RNA tunnel to the methyltransferase domain (MTase), preferably as a transcription state. The other conformation has the appendage averaged out, which is inaccessible to MTase. In both conformations, parallel P tetramers are revealed around MuV L, which, together with structures of other nsNSVs, demonstrates the diverse origins of the L-binding X domain of P. Our study links varying structures of nsNSV polymerase complexes with genome replication and transcription and points to a sliding model for polymerase complexes to advance along the RNA templates.

MeSH terms

  • Cryoelectron Microscopy*
  • DNA-Directed RNA Polymerases / chemistry
  • DNA-Directed RNA Polymerases / genetics
  • DNA-Directed RNA Polymerases / metabolism
  • DNA-Directed RNA Polymerases / ultrastructure
  • Models, Molecular
  • Mumps virus* / genetics
  • Mumps virus* / metabolism
  • Mumps virus* / ultrastructure
  • Phosphoproteins / chemistry
  • Phosphoproteins / metabolism
  • Phosphoproteins / ultrastructure
  • Protein Conformation
  • Protein Domains
  • RNA, Viral / genetics
  • RNA, Viral / metabolism
  • RNA, Viral / ultrastructure
  • RNA-Dependent RNA Polymerase / chemistry
  • RNA-Dependent RNA Polymerase / genetics
  • RNA-Dependent RNA Polymerase / metabolism
  • RNA-Dependent RNA Polymerase / ultrastructure
  • Transcription, Genetic
  • Viral Proteins* / chemistry
  • Viral Proteins* / genetics
  • Viral Proteins* / metabolism
  • Viral Proteins* / ultrastructure
  • Virus Replication