Continuous cropping system altered soil microbial communities and nutrient cycles

Front Microbiol. 2024 Apr 12:15:1374550. doi: 10.3389/fmicb.2024.1374550. eCollection 2024.

Abstract

Understanding the response of microbial communities and their potential functions is essential for sustainability of agroecosystems under long-term continuous cropping. However, limited research has focused on investigating the interaction between soil physicochemical factors and microbial community dynamics in agroecosystems under long-term continuous cropping. This study probed into the physicochemical properties, metabolites, and microbial diversity of tobacco rhizosphere soils cropped continuously for 0, 5, and 20 years. The relative abundance of bacterial genera associated with nutrient cycling (e.g., Sphingomonas) increased while potential plant pathogenic fungi and beneficial microorganisms showed synergistic increases with the duration of continuous cropping. Variations in soil pH, alkeline nitrogen (AN) content, and soil organic carbon (SOC) content drove the shifts in soil microbial composition. Metabolites such as palmitic acid, 3-hydroxypropionic acid, stearic acid, and hippuric acid may play a key role in soil acidification. Those results enhance our ability to predict shifts in soil microbial community structure associated with anthropogenic continuous cropping, which can have long-term implications for crop production.

Keywords: continuous-cropping system; environmental factors; microbial community; nutrient cycling; rhizospheric soil.

Grants and funding

The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This study was funded by Guizhou Provincial Science and Technology Plan Project (Grant No. ZK [2023]116), the Science and Technology Project of Guizhou Tobacco Company (Grant Nos. 2021XM21 and 2024XM17), the Science and Technology Project of Guizhou Tobacco Company Bijie Company (Grant No. 2023520500240161) and Zunyi Company (Grant No. 2022XM06), and the Science and Technology Project of Yunnan Tobacco Company (Grant No. 2021530000241035).