Deep learning models for ischemic stroke lesion segmentation in medical images: A survey

Comput Biol Med. 2024 Jun:175:108509. doi: 10.1016/j.compbiomed.2024.108509. Epub 2024 Apr 25.

Abstract

This paper provides a comprehensive review of deep learning models for ischemic stroke lesion segmentation in medical images. Ischemic stroke is a severe neurological disease and a leading cause of death and disability worldwide. Accurate segmentation of stroke lesions in medical images such as MRI and CT scans is crucial for diagnosis, treatment planning and prognosis. This paper first introduces common imaging modalities used for stroke diagnosis, discussing their capabilities in imaging lesions at different disease stages from the acute to chronic stage. It then reviews three major public benchmark datasets for evaluating stroke segmentation algorithms: ATLAS, ISLES and AISD, highlighting their key characteristics. The paper proceeds to provide an overview of foundational deep learning architectures for medical image segmentation, including CNN-based and transformer-based models. It summarizes recent innovations in adapting these architectures to the task of stroke lesion segmentation across the three datasets, analyzing their motivations, modifications and results. A survey of loss functions and data augmentations employed for this task is also included. The paper discusses various aspects related to stroke segmentation tasks, including prior knowledge, small lesions, and multimodal fusion, and then concludes by outlining promising future research directions. Overall, this comprehensive review covers critical technical developments in the field to support continued progress in automated stroke lesion segmentation.

Keywords: Characteristics of stroke segmentation; Ischemic stroke lesion segmentation; Public datasets; Segmentation techniques.

Publication types

  • Review

MeSH terms

  • Algorithms
  • Deep Learning*
  • Humans
  • Image Interpretation, Computer-Assisted / methods
  • Image Processing, Computer-Assisted / methods
  • Ischemic Stroke* / diagnostic imaging
  • Magnetic Resonance Imaging / methods
  • Stroke / diagnostic imaging
  • Tomography, X-Ray Computed / methods