Transcriptomic Analysis of Extracellular Vesicles in the Search for Novel Plasma and Thrombus Biomarkers of Ischemic Stroke Etiologies

Int J Mol Sci. 2024 Apr 16;25(8):4379. doi: 10.3390/ijms25084379.

Abstract

Accurate etiologic diagnosis provides an appropriate secondary prevention and better prognosis in ischemic stroke (IS) patients; still, 45% of IS are cryptogenic, urging us to enhance diagnostic precision. We have studied the transcriptomic content of plasma extracellular vesicles (EVs) (n = 21) to identify potential biomarkers of IS etiologies. The proteins encoded by the selected genes were measured in the sera of IS patients (n = 114) and in hypertensive patients with (n = 78) and without atrial fibrillation (AF) (n = 20). IGFBP-2, the most promising candidate, was studied using immunohistochemistry in the IS thrombi (n = 23) and atrium of AF patients (n = 13). In vitro, the IGFBP-2 blockade was analyzed using thromboelastometry and endothelial cell cultures. We identified 745 differentially expressed genes among EVs of cardioembolic, atherothrombotic, and ESUS groups. From these, IGFBP-2 (cutoff > 247.6 ng/mL) emerged as a potential circulating biomarker of embolic IS [OR = 8.70 (1.84-41.13) p = 0.003], which was increased in patients with AF vs. controls (p < 0.001) and was augmented in cardioembolic vs. atherothrombotic thrombi (p < 0.01). Ex vivo, the blockage of IGFBP-2 reduced clot firmness (p < 0.01) and lysis time (p < 0.001) and in vitro, diminished endothelial permeability (p < 0.05) and transmigration (p = 0.06). IGFBP-2 could be a biomarker of embolic IS and a new therapeutic target involved in clot formation and endothelial dysfunction.

Keywords: biomarkers; extracellular vesicles; ischemic stroke.

MeSH terms

  • Aged
  • Atrial Fibrillation / blood
  • Atrial Fibrillation / complications
  • Atrial Fibrillation / genetics
  • Atrial Fibrillation / metabolism
  • Biomarkers* / blood
  • Extracellular Vesicles* / genetics
  • Extracellular Vesicles* / metabolism
  • Female
  • Gene Expression Profiling
  • Humans
  • Insulin-Like Growth Factor Binding Protein 2* / blood
  • Insulin-Like Growth Factor Binding Protein 2* / genetics
  • Insulin-Like Growth Factor Binding Protein 2* / metabolism
  • Ischemic Stroke* / blood
  • Ischemic Stroke* / genetics
  • Ischemic Stroke* / metabolism
  • Male
  • Middle Aged
  • Thrombosis* / blood
  • Thrombosis* / etiology
  • Thrombosis* / metabolism
  • Transcriptome

Substances

  • Biomarkers
  • Insulin-Like Growth Factor Binding Protein 2
  • IGFBP2 protein, human