The regulatory network of the White Collar complex during early mushroom development in Schizophyllum commune

Microbiol Res. 2024 Jul:284:127736. doi: 10.1016/j.micres.2024.127736. Epub 2024 Apr 22.

Abstract

Blue light is an important signal for fungal development. In the mushroom-forming basidiomycete Schizophyllum commune, blue light is detected by the White Collar complex, which consists of WC-1 and WC-2. Most of our knowledge on this complex is derived from the ascomycete Neurospora crassa, where both WC-1 and WC-2 contain GATA zinc-finger transcription factor domains. In basidiomycetes, WC-1 is truncated and does not contain a transcription factor domain, but both WC-1 and WC-2 are still important for development. We show that dimerization of WC-1 and WC-2 happens independent of light in S. commune, but that induction by light is required for promoter binding by the White Collar complex. Furthermore, the White Collar complex is a promoter of transcription, but binding of the complex alone is not always sufficient to initiate transcription. For its function, the White Collar complex associates directly with the promoters of structural genes involved in mushroom development, like hydrophobins, but also promotes the expression of other transcription factors that play a role in mushroom development.

Keywords: ChIP-Seq; Light sensing; Mushrooms; Regulatory network; White Collar complex.

MeSH terms

  • Agaricales / genetics
  • Agaricales / growth & development
  • Agaricales / metabolism
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism
  • Fungal Proteins* / genetics
  • Fungal Proteins* / metabolism
  • Gene Expression Regulation, Fungal*
  • Gene Regulatory Networks
  • Light
  • Promoter Regions, Genetic*
  • Protein Binding
  • Schizophyllum* / genetics
  • Schizophyllum* / growth & development
  • Schizophyllum* / metabolism
  • Transcription Factors* / genetics
  • Transcription Factors* / metabolism