Foxp3 depends on Ikaros for control of regulatory T cell gene expression and function

Elife. 2024 Apr 24:12:RP91392. doi: 10.7554/eLife.91392.

Abstract

Ikaros is a transcriptional factor required for conventional T cell development, differentiation, and anergy. While the related factors Helios and Eos have defined roles in regulatory T cells (Treg), a role for Ikaros has not been established. To determine the function of Ikaros in the Treg lineage, we generated mice with Treg-specific deletion of the Ikaros gene (Ikzf1). We find that Ikaros cooperates with Foxp3 to establish a major portion of the Treg epigenome and transcriptome. Ikaros-deficient Treg exhibit Th1-like gene expression with abnormal production of IL-2, IFNg, TNFa, and factors involved in Wnt and Notch signaling. While Ikzf1-Treg-cko mice do not develop spontaneous autoimmunity, Ikaros-deficient Treg are unable to control conventional T cell-mediated immune pathology in response to TCR and inflammatory stimuli in models of IBD and organ transplantation. These studies establish Ikaros as a core factor required in Treg for tolerance and the control of inflammatory immune responses.

Keywords: chromosomes; epigenetics; gene expression; immunology; inflammation; mouse; tolerance; transcription factors.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Forkhead Transcription Factors* / genetics
  • Forkhead Transcription Factors* / metabolism
  • Gene Expression Regulation*
  • Ikaros Transcription Factor* / genetics
  • Ikaros Transcription Factor* / metabolism
  • Mice
  • Mice, Knockout
  • T-Lymphocytes, Regulatory* / immunology
  • T-Lymphocytes, Regulatory* / metabolism

Substances

  • Ikaros Transcription Factor
  • Forkhead Transcription Factors
  • Foxp3 protein, mouse
  • Zfpn1a1 protein, mouse

Associated data

  • GEO/GSE200179
  • GEO/GSE200178
  • GEO/GSE200176
  • GEO/GSE200177