Untargeted, tandem mass spectrometry metaproteome of Columbia River sediments

Microbiol Resour Announc. 2024 Apr 23:e0003324. doi: 10.1128/mra.00033-24. Online ahead of print.

Abstract

Rivers are critical ecosystems that impact global biogeochemical cycles. Nonetheless, a mechanistic understanding of river microbial metabolisms and their influences on geochemistry is lacking. Here, we announce metaproteomes of river sediments that are paired with metagenomes and metabolites, enabling an understanding of the microbial underpinnings of river respiration.

Keywords: genomes; hyporheic zone; metabolomics; metagenomics; metaproteomics; microbial ecology; river microbiology.