Aquatic Soundscape Recordings Reveal Diverse Vocalizations and Nocturnal Activity of an Endangered Frog

Am Nat. 2024 May;203(5):618-627. doi: 10.1086/729422. Epub 2024 Mar 13.

Abstract

AbstractAutonomous sensors provide opportunities to observe organisms across spatial and temporal scales that humans cannot directly observe. By processing large data streams from autonomous sensors with deep learning methods, researchers can make novel and important natural history discoveries. In this study, we combine automated acoustic monitoring with deep learning models to observe breeding-associated activity in the endangered Sierra Nevada yellow-legged frog (Rana sierrae), a behavior that current surveys do not measure. By deploying inexpensive hydrophones and developing a deep learning model to recognize breeding-associated vocalizations, we discover three undocumented R. sierrae vocalization types and find an unexpected temporal pattern of nocturnal breeding-associated vocal activity. This study exemplifies how the combination of autonomous sensor data and deep learning can shed new light on species' natural history, especially during times or in locations where human observation is limited or impossible.

Keywords: Rana sierrae; Sierra Nevada Aquatic Research Lab; acoustic monitoring; anuran; automated detection; machine learning; vocalization.

MeSH terms

  • Acoustics
  • Animals
  • Humans
  • Ranidae*
  • Vocalization, Animal*