Discovery of YFJ-36: Design, Synthesis, and Antibacterial Activities of Catechol-Conjugated β-Lactams against Gram-Negative Bacteria

J Med Chem. 2024 Apr 25;67(8):6705-6725. doi: 10.1021/acs.jmedchem.4c00265. Epub 2024 Apr 10.

Abstract

Cefiderocol is the first approved catechol-conjugated cephalosporin against multidrug-resistant Gram-negative bacteria, while its application was limited by poor chemical stability associated with the pyrrolidinium linker, moderate potency against Klebsiella pneumoniae and Acinetobacter baumannii, intricate procedures for salt preparation, and potential hypersensitivity. To address these issues, a series of novel catechol-conjugated derivatives were designed, synthesized, and evaluated. Extensive structure-activity relationships and structure-metabolism relationships (SMR) were conducted, leading to the discovery of a promising compound 86b (Code no. YFJ-36) with a new thioether linker. 86b exhibited superior and broad-spectrum in vitro antibacterial activity, especially against A. baumannii and K. pneumoniae, compared with cefiderocol. Potent in vivo efficacy was observed in a murine systemic infection model. Furthermore, the physicochemical stability of 86b in fluid medium at pH 6-8 was enhanced. 86b also reduced potential the risk of allergy owing to the quaternary ammonium linker. The improved properties of 86b supported its further research and development.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acinetobacter baumannii / drug effects
  • Animals
  • Anti-Bacterial Agents* / chemical synthesis
  • Anti-Bacterial Agents* / chemistry
  • Anti-Bacterial Agents* / pharmacology
  • Catechols* / chemical synthesis
  • Catechols* / chemistry
  • Catechols* / pharmacology
  • Cephalosporins / chemical synthesis
  • Cephalosporins / chemistry
  • Cephalosporins / pharmacology
  • Drug Design*
  • Drug Discovery
  • Gram-Negative Bacteria* / drug effects
  • Klebsiella pneumoniae / drug effects
  • Mice
  • Microbial Sensitivity Tests*
  • Structure-Activity Relationship
  • beta-Lactams / chemical synthesis
  • beta-Lactams / chemistry
  • beta-Lactams / pharmacology

Substances

  • Anti-Bacterial Agents
  • Catechols
  • beta-Lactams
  • catechol
  • Cephalosporins