Peptidomics Strategies to Evaluate Cancer Diagnosis, Prognosis, and Treatment

Methods Mol Biol. 2024:2758:401-423. doi: 10.1007/978-1-0716-3646-6_22.

Abstract

Peptides have potential bioactive functions, and the peptidomics landscape has been broadly investigated for various diseases, including cancer. In this chapter, we reviewed the past four years of literature available and selected 16 peer-reviewed publications exploring peptidomics in diagnosis, prognosis, and treatment in cancer research. We highlighted their main aims, mass spectrometry-based peptidomics, multi-omics, data-driven and in silico strategies, functional assays, and clinical applications. Moreover, we underscored several levels of difficulties in translating the peptidomics findings to clinical practice, aiming to learn with the accumulated knowledge and guide upcoming studies. Finally, this review reinforces the peptidomics robustness in discovering potential candidates for monitoring the several stages of cancer disease and therapeutic treatment, leveraging the management of cancer patients in the future.

Keywords: Biomarker; Cancer diagnosis; Immunopeptidomics; Mass spectrometry-based proteomics; Peptidomics; Prognosis; Treatment.

Publication types

  • Review

MeSH terms

  • Humans
  • Mass Spectrometry
  • Neoplasms* / diagnosis
  • Neoplasms* / therapy
  • Peptides / therapeutic use
  • Proteomics*

Substances

  • Peptides