PCNA Unloading Is Crucial for the Bypass of DNA Lesions Using Homologous Recombination

Int J Mol Sci. 2024 Mar 15;25(6):3359. doi: 10.3390/ijms25063359.

Abstract

DNA Damage Tolerance (DDT) mechanisms allow cells to bypass lesions in the DNA during replication. This allows the cells to progress normally through the cell cycle in the face of abnormalities in their DNA. PCNA, a homotrimeric sliding clamp complex, plays a central role in the coordination of various processes during DNA replication, including the choice of mechanism used during DNA damage bypass. Mono-or poly-ubiquitination of PCNA facilitates an error-prone or an error-free bypass mechanism, respectively. In contrast, SUMOylation recruits the Srs2 helicase, which prevents local homologous recombination. The Elg1 RFC-like complex plays an important role in unloading PCNA from the chromatin. We analyze the interaction of mutations that destabilize PCNA with mutations in the Elg1 clamp unloader and the Srs2 helicase. Our results suggest that, in addition to its role as a coordinator of bypass mechanisms, the very presence of PCNA on the chromatin prevents homologous recombination, even in the absence of the Srs2 helicase. Thus, PCNA unloading seems to be a pre-requisite for recombinational repair.

Keywords: DNA damage bypass; DNA repair; DNA replication; Elg1; PCNA; SUMO; Saccharomyces cerevisiae; Srs2; post-replicational repair; ubiquitin.

MeSH terms

  • Carrier Proteins / metabolism
  • Chromatin / genetics
  • Chromatin / metabolism
  • DNA / genetics
  • DNA / metabolism
  • DNA Damage
  • DNA Helicases / genetics
  • DNA Helicases / metabolism
  • DNA Replication
  • Homologous Recombination
  • Proliferating Cell Nuclear Antigen / genetics
  • Proliferating Cell Nuclear Antigen / metabolism
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins* / genetics
  • Saccharomyces cerevisiae Proteins* / metabolism

Substances

  • Proliferating Cell Nuclear Antigen
  • Saccharomyces cerevisiae Proteins
  • DNA Helicases
  • DNA
  • Chromatin
  • Elg1 protein, S cerevisiae
  • Carrier Proteins