Horizontal magnetic tweezers and its applications in single molecule micromanipulation experiments

Methods Enzymol. 2024:694:191-207. doi: 10.1016/bs.mie.2023.12.015. Epub 2024 Feb 5.

Abstract

Magnetic tweezers (MTs) have become indispensable tools for gaining mechanistic insights into the behavior of DNA-processing enzymes and acquiring detailed, high-resolution data on the mechanical properties of DNA. Currently, MTs have two distinct designs: vertical and horizontal (or transverse) configurations. While the vertical design and its applications have been extensively documented, there is a noticeable gap in comprehensive information pertaining to the design details, experimental procedures, and types of studies conducted with horizontal MTs. This article aims to address this gap by providing a concise overview of the fundamental principles underlying transverse MTs. It will explore the multifaceted applications of this technique as an exceptional instrument for scrutinizing DNA and its interactions with DNA-binding proteins at the single-molecule level.

Keywords: DNA-histone interactions; DNA–protein complexes; Single-molecule micromanipulation; horizontal magnetic tweezers; nucleosomes.

Publication types

  • Review

MeSH terms

  • DNA* / chemistry
  • Magnetic Phenomena
  • Micromanipulation / methods
  • Nanotechnology / methods
  • Optical Tweezers*

Substances

  • DNA