Organotypic culture of human brain explants as a preclinical model for AI-driven antiviral studies

EMBO Mol Med. 2024 Apr;16(4):1004-1026. doi: 10.1038/s44321-024-00039-9. Epub 2024 Mar 12.

Abstract

Viral neuroinfections represent a major health burden for which the development of antivirals is needed. Antiviral compounds that target the consequences of a brain infection (symptomatic treatment) rather than the cause (direct-acting antivirals) constitute a promising mitigation strategy that requires to be investigated in relevant models. However, physiological surrogates mimicking an adult human cortex are lacking, limiting our understanding of the mechanisms associated with viro-induced neurological disorders. Here, we optimized the Organotypic culture of Post-mortem Adult human cortical Brain explants (OPAB) as a preclinical platform for Artificial Intelligence (AI)-driven antiviral studies. OPAB shows robust viability over weeks, well-preserved 3D cytoarchitecture, viral permissiveness, and spontaneous local field potential (LFP). Using LFP as a surrogate for neurohealth, we developed a machine learning framework to predict with high confidence the infection status of OPAB. As a proof-of-concept, we showed that antiviral-treated OPAB could partially restore LFP-based electrical activity of infected OPAB in a donor-dependent manner. Together, we propose OPAB as a physiologically relevant and versatile model to study neuroinfections and beyond, providing a platform for preclinical drug discovery.

Keywords: Artificial Intelligence; Bunyavirus; Neurotropic Virus; Small Molecule; Tahyna Virus.

MeSH terms

  • Antiviral Agents* / pharmacology
  • Artificial Intelligence
  • Brain
  • Hepatitis C, Chronic*
  • Humans
  • Microphysiological Systems

Substances

  • Antiviral Agents