Phylogenomic delineation of two new species of ascomycetous yeasts, Wickerhamiella koratensis sp. nov. and Wickerhamiella limtongiae sp. nov., and proposal of two synonyms, Wickerhamiella infanticola and Wickerhamiella tropicalis

Int J Syst Evol Microbiol. 2024 Feb;74(2). doi: 10.1099/ijsem.0.006282.

Abstract

Two novel ascomycetous yeast species of the genus Wickerhamiella are proposed based on isolates obtained in Thailand from food waste and the fruiting body of a polypore fungus, and on a combination of conventional DNA-barcode sequence analyses and whole-genome phylogenies. We focus on a particular subclade of the genus Wickerhamiella that contains species found in anthropic environments and describe Wickerhamiella limtongiae sp. nov. (DMKU-FW31-5T=PYCC 9022T=TBRC 15055T), found on food waste samples. In an adjacent clade, we describe Wickerhamiella koratensis sp. nov. (DMKU-KO16T=PYCC 8908T=TBRC 14869T), which represents the closest relative of Wickerhamiella slavikovae and was isolated from the fruiting body of Bjerkandera sp. In the subclade of W. limtongiae sp. nov., we propose that Wickerhamiella infanticola should be regarded as a synonym of Wickerhamiella sorbophila and that Wickerhamiella tropicalis should be regarded as a synonym of Wickerhamiella verensis.

Keywords: Wickerhamiella infanticola; Wickerhamiella koratensis sp. nov.; Wickerhamiella limtongiae sp. nov.; Wickerhamiella tropicalis; taxogenomics; whole-genome phylogeny.

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / genetics
  • DNA, Fungal / genetics
  • Fatty Acids / chemistry
  • Food
  • Mycological Typing Techniques
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Refuse Disposal*
  • Saccharomycetales*
  • Sequence Analysis, DNA
  • Thailand

Substances

  • DNA, Fungal
  • RNA, Ribosomal, 16S
  • DNA, Bacterial
  • Fatty Acids

Supplementary concepts

  • Wickerhamiella infanticola