Establishing a pulmonary aspergillus fumigatus infection diagnostic platform based on RPA-CRISPR-Cas12a

World J Microbiol Biotechnol. 2024 Feb 29;40(4):116. doi: 10.1007/s11274-024-03940-0.

Abstract

In this study, we devised a diagnostic platform harnessing a combination of recombinase polymerase amplification (RPA) and the clustered regularly interspaced short palindromic repeats (CRISPR)/Cas12a system. Notably, this platform obviates the need for intricate equipment and finds utility in diverse settings. Two result display methods were incorporated in this investigation: the RPA-Cas12a-fluorescence method and the RPA-Cas12a-LFS (lateral flow strip). Upon validation, both display platforms exhibited no instances of cross-reactivity, with seven additional types of fungal pathogens responsible for respiratory infections. The established detection limit was ascertained to be as low as 102 copies/µL. In comparison to fluorescence quantitative PCR, the platform demonstrated a sensitivity of 96.7%, a specificity of 100%, and a consistency rate of 98.0%.This platform provides expeditious, precise, and on-site detection capabilities, thereby rendering it a pivotal diagnostic instrument amenable for deployment in primary healthcare facilities and point-of-care settings.

Keywords: Aspergillus fumigatus; CRISPR/Cas12a; Invasive pulmonary aspergillosis; RPA.

MeSH terms

  • Aspergillus fumigatus / genetics
  • CRISPR-Cas Systems
  • Pneumonia*
  • Recombinases*
  • Staining and Labeling

Substances

  • Recombinases

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