Characterization of novel mevalonate kinases from the tardigrade Ramazzottius varieornatus and the psychrophilic archaeon Methanococcoides burtonii

Acta Crystallogr D Struct Biol. 2024 Mar 1;80(Pt 3):203-215. doi: 10.1107/S2059798324001360. Epub 2024 Feb 27.

Abstract

Mevalonate kinase is central to the isoprenoid biosynthesis pathway. Here, high-resolution X-ray crystal structures of two mevalonate kinases are presented: a eukaryotic protein from Ramazzottius varieornatus and an archaeal protein from Methanococcoides burtonii. Both enzymes possess the highly conserved motifs of the GHMP enzyme superfamily, with notable differences between the two enzymes in the N-terminal part of the structures. Biochemical characterization of the two enzymes revealed major differences in their sensitivity to geranyl pyrophosphate and farnesyl pyrophosphate, and in their thermal stabilities. This work adds to the understanding of the structural basis of enzyme inhibition and thermostability in mevalonate kinases.

Keywords: GHMP enzyme superfamily; Methanococcoides burtonii; Ramazzottius varieornatus; feedback inhibition; mevalonate kinases.

MeSH terms

  • Archaea* / metabolism
  • Methanosarcinaceae / chemistry
  • Methanosarcinaceae / metabolism
  • Mevalonic Acid* / metabolism
  • Phosphotransferases (Alcohol Group Acceptor) / chemistry

Substances

  • mevalonate kinase
  • Mevalonic Acid
  • Phosphotransferases (Alcohol Group Acceptor)