Transcriptome Analysis Reveals the Molecular Mechanisms of BR Negative Regulatory Factor StBIN2 Maintaining Tuber Dormancy

Int J Mol Sci. 2024 Feb 13;25(4):2244. doi: 10.3390/ijms25042244.

Abstract

Potato is an important food crop. After harvest, these tubers will undergo a period of dormancy. Brassinosteroids (BRs) are a new class of plant hormones that regulate plant growth and seed germination. In this study, 500 nM of BR was able to break the dormancy of tubers. Additionally, exogenous BR also upregulated BR signal transduction genes, except for StBIN2. StBIN2 is a negative regulator of BR, but its specific role in tuber dormancy remains unclear. Transgenic methods were used to regulate the expression level of StBIN2 in tubers. It was demonstrated that the overexpression of StBIN2 significantly prolonged tuber dormancy while silencing StBIN2 led to premature sprouting. To further investigate the effect of StBIN2 on tuber dormancy, RNA-Seq was used to analyze the differentially expressed genes in OE-StBIN2, RNAi-StBIN2, and WT tubers. The results showed that StBIN2 upregulated the expression of ABA signal transduction genes but inhibited the expression of lignin synthesis key genes. Meanwhile, it was also found that StBIN2 physically interacted with StSnRK2.2 and StCCJ9. These results indicate that StBIN2 maintains tuber dormancy by mediating ABA signal transduction and lignin synthesis. The findings of this study will help us better understand the molecular mechanisms underlying potato tuber dormancy and provide theoretical support for the development of new varieties using related genes.

Keywords: ABA signal; BR; RNA-seq; Solanum tuberosum L.; StBIN2; lignin synthesis; tuber dormancy.

MeSH terms

  • Gene Expression Profiling
  • Gene Expression Regulation, Plant
  • Lignin* / metabolism
  • Plant Development
  • Plant Dormancy / genetics
  • Plant Growth Regulators / metabolism
  • Plant Tubers
  • Solanum tuberosum* / genetics

Substances

  • Lignin
  • Plant Growth Regulators