Serine/arginine-rich splicing factor 7 promotes the type I interferon response by activating Irf7 transcription

Cell Rep. 2024 Mar 26;43(3):113816. doi: 10.1016/j.celrep.2024.113816. Epub 2024 Feb 22.

Abstract

Tight regulation of macrophage immune gene expression is required to fight infection without risking harmful inflammation. The contribution of RNA-binding proteins (RBPs) to shaping the macrophage response to pathogens remains poorly understood. Transcriptomic analysis reveals that a member of the serine/arginine-rich (SR) family of mRNA processing factors, SRSF7, is required for optimal expression of a cohort of interferon-stimulated genes in macrophages. Using genetic and biochemical assays, we discover that in addition to its canonical role in regulating alternative splicing, SRSF7 drives transcription of interferon regulatory transcription factor 7 (IRF7) to promote antiviral immunity. At the Irf7 promoter, SRSF7 maximizes STAT1 transcription factor binding and RNA polymerase II elongation via cooperation with the H4K20me1 histone methyltransferase KMT5a (SET8). These studies define a role for an SR protein in activating transcription and reveal an RBP-chromatin network that orchestrates macrophage antiviral gene expression.

Keywords: CP: Cell biology; CP: Molecular biology; RNA binding proteins; antiviral immunity; chromatin; co-transcriptional splicing; histone methylation; innate immunity; pre-mRNA splicing.

MeSH terms

  • Alternative Splicing / genetics
  • Humans
  • Interferon Type I*
  • Macrophages
  • Promoter Regions, Genetic / genetics
  • RNA Splicing Factors
  • Serine-Arginine Splicing Factors / genetics
  • Transcription, Genetic

Substances

  • Interferon Type I
  • RNA Splicing Factors
  • Serine-Arginine Splicing Factors