Understanding the drivers of distribution and assemblage composition of aquatic organisms is an important aspect of management and conservation, especially in freshwater systems that are inordinately facing increasing anthropogenic pressures and decreasing biodiversity. For stream organisms, habitat conditions during high flows may be impossible to measure in the field, but can be an important factor for their distribution, especially for less mobile organisms like freshwater mussels. Hence, the objective of this study was to use a two dimensional HEC-RAS model to simulate hydraulic conditions during high and baseline flows (flows approx. 10-600 x and 0.7 x median daily flows respectively) in a 20 km segment in the San Saba River, Texas in combination with existing mussel survey data from 200 sites (collected every 100m) to 1) examine whether hydraulic conditions differed between areas of increased mussel richness and diversity (referred to as hotspots) and other sites, and 2) understand how well site occupancy and species abundance could be explained by hydraulic conditions occurring under different flow conditions. The results showed that richness and diversity hotspots occurred in deeper areas with lower shear stress, stream power, and Froude number during both high and low flows. Occupancy could be predicted with 67-79% accuracy at the site scale and 60-70% accuracy at the mesohabitat scale (∼20 to 1200 m long). In addition, hydraulic conditions across flow scenarios explained up to 55% of variation in species abundances, but predictions were less successful for species often observed to occupy micro-scale flow refuges such as bedrock crevices. The results indicate that pools may serve as important refuge for all species during both high and low flow events, which may be relatively unique to bedrock-dominated systems. Understanding hydraulic conditions that occur at extreme flows such as these is important given that the frequency and magnitude of such events are increasing due to climate change.
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