Streamlining assays of glycosyltransferases activity using in vitro GT-array (i-GT-ray) platform: Application to family GT37 fucosyltransferases

J Biol Chem. 2024 Mar;300(3):105734. doi: 10.1016/j.jbc.2024.105734. Epub 2024 Feb 7.

Abstract

Numerous putative glycosyltransferases (GTs) have been identified using bioinformatic approaches. However, demonstrating the activity of these GTs remains a challenge. Here, we describe the development of a rapid in vitro GT-array screening platform for activity of GTs. GT-arrays are generated by cell-free in vitro protein synthesis and binding using microplates precoated with a N-terminal Halo- or a C-terminal GST-tagged GT-encoding plasmid DNA and a capture antibody. These arrays are then used for screening of transferase activities and the reactions are monitored by a luminescence GLO assay. The products formed by these reactions can be analyzed directly from the microplates by mass spectrometry. Using this platform, a total of 280 assays were performed to screen 22 putative fucosyltransferases (FUTs) from family GT37 (seven from Arabidopsis and 15 from rice) for activity toward five acceptors: non-fucosylated tamarind xyloglucan (TXyG), arabinotriose (Ara3), non-fucosylated rhamnogalacturonan I (RG-I), and RG-II from the mur1-1 Arabidopsis mutant, and the celery RG-II monomer lacking Arap and MeFuc of chain B and l-Gal of chain A. Our screen showed that AtFUT2, AtFUT5, and AtFUT10 have activity toward RG-I, while AtFUT8 was active on RG-II. Five rice OsFUTs have XyG-FUT activity and four rice OsFUTs have activity toward Ara3. None of the putative OsFUTs were active on the RG-I and RG-II. However, promiscuity toward acceptors was observed for several FUTs. These findings extend our knowledge of cell wall polysaccharide fucosylation in plants. We believe that in vitro GT-array platform provides a valuable tool for cell wall biochemistry and other research fields.

Keywords: NAPPA; cell wall; fucosyltransferases; glycosyltransferases; high-throughput.

MeSH terms

  • Apium / enzymology
  • Apium / genetics
  • Arabidopsis / enzymology
  • Arabidopsis / genetics
  • Arabidopsis / metabolism
  • Cell Wall / chemistry
  • Cell Wall / enzymology
  • Cell Wall / metabolism
  • Enzyme Assays* / instrumentation
  • Enzyme Assays* / methods
  • Fucosyltransferases* / analysis
  • Fucosyltransferases* / classification
  • Fucosyltransferases* / metabolism
  • Glycosyltransferases* / analysis
  • Glycosyltransferases* / metabolism
  • Mass Spectrometry
  • Oryza / enzymology
  • Plant Proteins* / analysis
  • Plant Proteins* / metabolism
  • Polysaccharides / chemistry
  • Polysaccharides / metabolism

Substances

  • Fucosyltransferases
  • Glycosyltransferases
  • Plant Proteins
  • Polysaccharides
  • rhamnogalacturonan I
  • xyloglucan