The biogenesis, identification, and functionality of circWWP2 in lipopolysaccharide stimulated macrophages

Gene. 2024 May 5:905:148240. doi: 10.1016/j.gene.2024.148240. Epub 2024 Feb 4.

Abstract

CircRNA, a non-coding RNA, is an ideal biomarker and a suitable potential therapeutic target for various disease due to its high stability, species conservation and cell/tissue specificity. Our previous study has found a circular RNA WWP2 (circWWP2) was significantly decreased in chicken macrophages during bacterial infection. However, the function of circWWP2 in chicken macrophages remains unclear. In this study, it was demonstrated that circWWP2 was a stable circular RNA created by back-splicing of exons 2 to 4 of WWP2 via PCR amplification, Sanger sequencing, RNase R exonuclease digestion, and RT-qPCR. Moreover, bioinformatics analysis showed circWWP2 could interact with 13 miRNAs and target 3,264 genes, which were significantly enriched in lysosomes, IgA-producing intestinal immune networks for IgA production, and Notch signaling pathway. Furthermore, CCK8 and RT-qPCR indicated that overexpression of circWWP2 could promote lipopolysaccharide (LPS)-induced cellular injury by decreasing cell viability and increasing the expression levels of pro-inflammatory cytokines and pro-apoptosis genes, and NO production. CircWWP2 may exert a potential target for the treatment of bacterial infection. Further experiments are necessary to validate the specific mechanism that circWWP2 regulates LPS induced cellular immune responses.

Keywords: Chicken; Functional analysis; Lipopolysaccharide; Macrophages; circWWP2.

MeSH terms

  • Bacterial Infections*
  • Humans
  • Immunoglobulin A / metabolism
  • Lipopolysaccharides / metabolism
  • Lipopolysaccharides / pharmacology
  • Macrophages / metabolism
  • MicroRNAs* / genetics
  • RNA, Circular / genetics
  • RNA, Circular / metabolism
  • Ubiquitin-Protein Ligases / metabolism

Substances

  • Lipopolysaccharides
  • RNA, Circular
  • MicroRNAs
  • Immunoglobulin A
  • WWP2 protein, human
  • Ubiquitin-Protein Ligases