Isolation and whole genome sequencing of North American lineage class I avian orthoavulavirus 1 isolated from wild Eurasian teal in South Korea

Avian Pathol. 2024 Jun;53(3):194-198. doi: 10.1080/03079457.2024.2312116. Epub 2024 Feb 14.

Abstract

We report the first North American origin class I avian orthoavulavirus 1 (AOAV-1) isolated from a faecal dropping of wild Eurasian teal (Anas crecca) in South Korea. Whole genome sequencing and comparative phylogenetic analysis revealed that the AOAV-1/Eurasian teal/South Korea/KU1405-3/2017 virus belongs to the sub-genotype 1.2 of class I AOAV-1. Phylogenetic analysis suggested multiple introductions of the North American sub-genotype 1.2 viruses into Asia and its establishment in the wild bird population in East Asia since May 2011. These results provide information on the epidemiology of AOAV-1, particularly the role of migratory wild birds in exchanging viruses between the Eurasian and North American continents. Enhanced genomic surveillance is required to improve our understanding on the evolution and transmission dynamics of AOAV-1 in wild birds.

Keywords: Avian orthoavulavirus; Bayesian phylogenetic analysis; Newcastle disease virus; intercontinental spread; phylogeny; whole genome sequencing.

MeSH terms

  • Animals
  • Animals, Wild / genetics
  • Birds
  • Ducks*
  • Influenza in Birds*
  • Newcastle disease virus / genetics
  • North America / epidemiology
  • Phylogeny
  • Republic of Korea / epidemiology
  • Whole Genome Sequencing / veterinary