Dynamic profiles of lncRNAs reveal a functional natural antisense RNA that regulates the development of Schistosoma japonicum

PLoS Pathog. 2024 Jan 29;20(1):e1011949. doi: 10.1371/journal.ppat.1011949. eCollection 2024 Jan.

Abstract

Schistosomes are flatworm parasites that undergo a complex life cycle involving two hosts. The regulation of the parasite's developmental processes relies on both coding RNAs and non-coding RNAs. However, the roles of non-coding RNAs, including long non-coding RNAs (lncRNAs) in schistosomes remain largely unexplored. Here we conduct advanced RNA sequencing on male and female S. japonicum during their pairing and reproductive development, resulting in the identification of nearly 8,000 lncRNAs. This extensive dataset enables us to construct a comprehensive co-expression network of lncRNAs and mRNAs, shedding light on their interactions during the crucial reproductive stages within the mammalian host. Importantly, we have also revealed a specific lncRNA, LNC3385, which appears to play a critical role in the survival and reproduction of the parasite. These findings not only enhance our understanding of the dynamic nature of lncRNAs during the reproductive phase of schistosomes but also highlight LNC3385 as a potential therapeutic target for combating schistosomiasis.

MeSH terms

  • Animals
  • Female
  • Male
  • Mammals
  • Parasites* / genetics
  • RNA, Antisense / genetics
  • RNA, Long Noncoding* / genetics
  • Schistosoma japonicum* / genetics
  • Schistosomiasis* / parasitology

Substances

  • RNA, Long Noncoding
  • RNA, Antisense

Grants and funding

This research was supported by the National Key Research and Development Program of China (No. 2021YFC2300800, 2021YFC2300803 to JW and WH), National Natural Science Foundation of China (31972699, 31725025 to WH), Science and Technology Leading Talent Team in Inner Mongolia Autonomous Region (2022LJRC0009 to WH). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.