Growth-induced collective bending and kinetic trapping of cytoskeletal filaments

bioRxiv [Preprint]. 2024 Jan 10:2024.01.09.574885. doi: 10.1101/2024.01.09.574885.

Abstract

Growth and turnover of actin filaments play a crucial role in the construction and maintenance of actin networks within cells. Actin filament growth occurs within limited space and finite subunit resources in the actin cortex. To understand how filament growth shapes the emergent architecture of actin networks, we developed a minimal agent-based model coupling filament mechanics and growth in a limiting subunit pool. We find that rapid filament growth induces kinetic trapping of highly bent actin filaments. Such collective bending patterns are long-lived, organized around nematic defects, and arises from competition between filament polymerization and bending elasticity. The stability of nematic defects and the extent of kinetic trapping are amplified by an increase in the abundance of the actin pool and by crosslinking the network. These findings suggest that kinetic trapping is a robust consequence of growth in crowded environments, providing a route to program shape memory in actin networks.

Keywords: actin network assembly; agent-based modeling; filament growth; kinetic trapping; topological defects.

Publication types

  • Preprint