Structural Insights into the Penicillin-Binding Protein 4 (DacB) from Mycobacterium tuberculosis

Int J Mol Sci. 2024 Jan 12;25(2):983. doi: 10.3390/ijms25020983.

Abstract

Mycobacterium tuberculosis, a major cause of mortality from a single infectious agent, possesses a remarkable mycobacterial cell envelope. Penicillin-Binding Proteins (PBPs) are a family of bacterial enzymes involved in the biosynthesis of peptidoglycan. PBP4 (DacB) from M. tuberculosis (MtbPBP4) has been known to function as a carboxypeptidase, and the role and significance of carboxypeptidases as targets for anti-tuberculosis drugs or antibiotics have been extensively investigated over the past decade. However, their precise involvement remains incompletely understood. In this study, we employed predictive modeling and analyzed the three-dimensional structure of MtbPBP4. Interestingly, MtbPBP4 displayed a distinct domain structure compared to its homologs. Docking studies with meropenem verified the presence of active site residues conserved in PBPs. These findings establish a structural foundation for comprehending the molecular function of MtbPBP4 and offer a platform for the exploration of novel antibiotics.

Keywords: Mycobacterium tuberculosis; antibiotics; penicillin-binding protein.

MeSH terms

  • Antitubercular Agents
  • Cell Membrane
  • Cell Wall
  • Mycobacterium tuberculosis*
  • Penicillin-Binding Proteins / genetics

Substances

  • Penicillin-Binding Proteins
  • Antitubercular Agents