Performance of plant-produced RBDs as SARS-CoV-2 diagnostic reagents: a tale of two plant platforms

Front Plant Sci. 2024 Jan 4:14:1325162. doi: 10.3389/fpls.2023.1325162. eCollection 2023.

Abstract

The COVID-19 pandemic has underscored the need for rapid and cost-effective diagnostic tools. Serological tests, particularly those measuring antibodies targeting the receptor-binding domain (RBD) of the virus, play a pivotal role in tracking infection dynamics and vaccine effectiveness. In this study, we aimed to develop a simple enzyme-linked immunosorbent assay (ELISA) for measuring RBD-specific antibodies, comparing two plant-based platforms for diagnostic reagent production. We chose to retain RBD in the endoplasmic reticulum (ER) to prevent potential immunoreactivity issues associated with plant-specific glycans. We produced ER-retained RBD in two plant systems: a stable transformation of BY-2 plant cell culture (BY2-RBD) and a transient transformation in Nicotiana benthamiana using the MagnICON system (NB-RBD). Both systems demonstrated their suitability, with varying yields and production timelines. The plant-made proteins revealed unexpected differences in N-glycan profiles, with BY2-RBD displaying oligo-mannosidic N-glycans and NB-RBD exhibiting a more complex glycan profile. This difference may be attributed to higher recombinant protein synthesis in the N. benthamiana system, potentially overloading the ER retention signal, causing some proteins to traffic to the Golgi apparatus. When used as diagnostic reagents in ELISA, BY2-RBD outperformed NB-RBD in terms of sensitivity, specificity, and correlation with a commercial kit. This discrepancy may be due to the distinct glycan profiles, as complex glycans on NB-RBD may impact immunoreactivity. In conclusion, our study highlights the potential of plant-based systems for rapid diagnostic reagent production during emergencies. However, transient expression systems, while offering shorter timelines, introduce higher heterogeneity in recombinant protein forms, necessitating careful consideration in serological test development.

Keywords: BY-2 cell culture; COVID-19 pandemic; RBD production; diagnostics; glycan profiles; plant-based biologics; serological tests; transient expression.

Grants and funding

The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This work has been performed in the context of the “European Union’s Horizon 2020 Research and Innovation Programme” under Grant Agreement 774078 Pharma Factory project (https://pharmafactory.org/). GS-M acknowledges the Spanish Ministry of Science, Innovation, and Universities for FPI fellowship PRE2019-088852. The authors acknowledge the University of Rouen Normandie and the ANR PhaeomAbs PIA Grand défi Biomédicaments for its financial support. Dr. Marie-Laure Walet-Balieu from Université de Rouen Normandie, INSERM US 51, CNRS UAR 2026, HeRacLeS-PISSARO, F-76000 Rouen, France, is acknowledged for technical help with the injections in LC-ESI MS MS. HeRacLeS PISSARO Proteomics Platform was supported by Rouen University, INSERM, Normandy Region and the European Union. Europe gets involved in Normandy with European Regional Development Fund (ERDF). We thank the excellent technical assistance of Jaana Rikkinen and Kaisa Rinta-Harri at VTT.